BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B08SP1|AL428499
(840 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1628 0.0
>3x_Contig1682
Length = 16889
Score = 1628 bits (814), Expect = 0.0
Identities = 828/840 (98%)
Strand = Plus / Plus
Query: 1 gatcagcttctgtttcaccggcttctagcggagttggtgcggtttcttcaattgtctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11499 gatcagcttctgtttcaccggcttctagcggagttggtgcggtttcttcaattgtctcgt 11558
Query: 61 ttgctgtattgtctattatttctgttggttgctcttctgccgggacttctacaggaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11559 ttgctgtattgtctattatttctgttggttgctcttctgccgggacttctacaggaactt 11618
Query: 121 cttctacggatgcttcgacattgatctcttctccgacggtaggagcttcggatgctggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11619 cttctacggatgcttcgacattgatctcttctccgacggtaggagcttcggatgctggag 11678
Query: 181 cttcttcttcttcttcttgtttcagcacttgtggctgatcagttggcggtgttgccgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11679 cttcttcttcttcttcttgtttcagcacttgtggctgatcagttggcggtgttgccgctt 11738
Query: 241 ctggttcttcatgtgaagatagtgtctctggctcttcttctacctttytggatgcttctt 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 11739 ctggttcttcatgtgaagatagtgtctctggctcttcttctacctttttggatgcttctt 11798
Query: 301 gtgcttcttgtggaggtgttacctctgagacagctggttctgtttcttctgggacaactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11799 gtgcttcttgtggaggtgttacctctgagacagctggttctgtttcttctgggacaactg 11858
Query: 361 actctggttcttcttggacagctggttctgtttcttcttggacgatcagttctgtytctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 11859 actctggttcttcttggacagctggttctgtttcttcttggacgatcagttctgtttctt 11918
Query: 421 cttgaacgaccggtgcattthcttctggagctggttgtgtttctyctggaacaattggtt 480
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 11919 cttgaacgaccggtgcattttcttctggagctggttgtgtttcttctggaacaattggtt 11978
Query: 481 caactacttctacttcttttgcagtcgtttctgtcccatctggagatgtcgcctgtactg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 11979 caactacttctacttcttttgcagtcgtttctgtcccatctggagatgtcgcctgttctg 12038
Query: 541 gctccctctctggtgcagtttccttcaaggcatcacctgacgaaggtgcagctgctgtga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12039 gctccctctctggtgcagtttccttcaaggcatcacctgacgaaggtgcagctgctgtga 12098
Query: 601 acttgtaattwaaraaatwrgatggawctgaatccaggtagaaatctctgacacccacga 660
|||||||||| || |||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 12099 acttgtaatttaagaaattggatggatctgaatccaggtagaaatctctgacacccacga 12158
Query: 661 ttcgtttttccagttcacaggccctaatccattcaggtctgacaattggtatattgtwat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 12159 ttcgtttttccagttcacaggccctaatccattcaggtctgacaattggtatattgttat 12218
Query: 721 ctctagcatgagccaattcctcatcggaagtaacgccttcgctatcttcgaactctgttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12219 ctctagcatgagccaattcctcatcggaagtaacgccttcgctatcttcgaactctgttg 12278
Query: 781 caatgaaatgtgtagtctctaaagtgacatgatcttgtaaaggtttggcmccgatatttt 840
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 12279 caatgaaatgtgtagtctctaaagtgacatgatcttgtaaaggtttggcaccgatatttt 12338
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7162
Number of Sequences: 1807
Number of extensions: 7162
Number of successful extensions: 325
Number of sequences better than 1.0e-20: 1
length of query: 840
length of database: 10,358,551
effective HSP length: 16
effective length of query: 824
effective length of database: 10,329,639
effective search space: 8511622536
effective search space used: 8511622536
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)